--- name: meta-results-forest-plot-analyzer description: Analyzes forest plots for meta-analysis, generating detailed descriptions and formatting figure legends in Chinese or English. Use when the user wants to interpret a forest plot image, describe its statistical significance (heterogeneity, p-value), and format the output with specific figure legends. license: MIT author: aipoch --- > **Source**: [https://github.com/aipoch/medical-research-skills](https://github.com/aipoch/medical-research-skills) ## When to Use - Use this skill when the request matches its documented task boundary. - Use it when the user can provide the required inputs and expects a structured deliverable. - Prefer this skill for repeatable, checklist-driven execution rather than open-ended brainstorming. ## Key Features - Scope-focused workflow aligned to: Analyzes forest plots for meta-analysis, generating detailed descriptions and formatting figure legends in Chinese or English. Use when the user wants to interpret a forest plot image, describe its statistical significance (heterogeneity, p-value), and format the output with specific figure legends. - Packaged executable path(s): `scripts/format_result.py` plus 1 additional script(s). - Structured execution path designed to keep outputs consistent and reviewable. ## Dependencies - `Python`: `3.10+`. Repository baseline for current packaged skills. - `Third-party packages`: `not explicitly version-pinned in this skill package`. Add pinned versions if this skill needs stricter environment control. ## Example Usage See `## Usage` above for related details. ```bash cd "20260316/scientific-skills/Academic Writing/meta-results-forest-plot-analyzer" python -m py_compile scripts/format_result.py python scripts/format_result.py --help ``` Example run plan: 1. Confirm the user input, output path, and any required config values. 2. Edit the in-file `CONFIG` block or documented parameters if the script uses fixed settings. 3. Run `python scripts/format_result.py` with the validated inputs. 4. Review the generated output and return the final artifact with any assumptions called out. ## Implementation Details See `## Workflow` above for related details. - Execution model: validate the request, choose the packaged workflow, and produce a bounded deliverable. - Input controls: confirm the source files, scope limits, output format, and acceptance criteria before running any script. - Primary implementation surface: `scripts/format_result.py` with additional helper scripts under `scripts/`. - Parameters to clarify first: input path, output path, scope filters, thresholds, and any domain-specific constraints. - Output discipline: keep results reproducible, identify assumptions explicitly, and avoid undocumented side effects. ## Validation Shortcut Run this minimal command first to verify the supported execution path: ```bash python scripts/validate_skill.py --help ``` ## Usage 1. **Analyze Image**: The skill first uses a Vision LLM to describe the forest plot. 2. **Format Output**: The skill then runs a script to insert citation markers and append figure legends. ## Workflow ### 1. Image Analysis (Vision LLM) The model analyzes the provided forest plot image along with optional metadata (title, statistics, outcome name). **Prompt Guidelines:** * Describe the forest plot in detail (>300 words). * Include heterogeneity (I²), P-value, and effect sizes. * Mention the number of studies and sample sizes if visible. * Conclude on the statistical significance. * **Language**: Strictly follow the requested language (Chinese or English). ### 2. Output Formatting (Script) Run `scripts/format_result.py` to finalize the text. **Formatting Rules:** * **Citation**: Inserts `(Figure 2)` before the last punctuation mark of the description. * **Header**: Adds `**Forest Plot**` (English) . * **Footer**: Appends a placeholder for the image and the figure legend: * English: `**Figure 2 Forest plot of the pooled effect size**` ## Examples **User Input:** > "Analyze this forest plot. Title: 'Effect of X on Y'. Statistics: I2=50%. Language: English." **Process:** 1. LLM generates description: "... The heterogeneity was moderate (I²=50%). .. The results were significant." 2. Script formats it: > **Forest Plot** > > ... The results were significant(Figure 2). > > {insert your image here} > > **Figure 2 Forest plot of the pooled effect size** ## When Not to Use - Do not use this skill when the required source data, identifiers, files, or credentials are missing. - Do not use this skill when the user asks for fabricated results, unsupported claims, or out-of-scope conclusions. - Do not use this skill when a simpler direct answer is more appropriate than the documented workflow. ## Required Inputs - A clearly specified task goal aligned with the documented scope. - All required files, identifiers, parameters, or environment variables before execution. - Any domain constraints, formatting requirements, and expected output destination if applicable. ## Output Contract - Return a structured deliverable that is directly usable without reformatting. - If a file is produced, prefer a deterministic output name such as `meta_results_forest_plot_analyzer_result.md` unless the skill documentation defines a better convention. - Include a short validation summary describing what was checked, what assumptions were made, and any remaining limitations. ## Validation and Safety Rules - Validate required inputs before execution and stop early when mandatory fields or files are missing. - Do not fabricate measurements, references, findings, or conclusions that are not supported by the provided source material. - Emit a clear warning when credentials, privacy constraints, safety boundaries, or unsupported requests affect the result. - Keep the output safe, reproducible, and within the documented scope at all times. ## Failure Handling - If validation fails, explain the exact missing field, file, or parameter and show the minimum fix required. - If an external dependency or script fails, surface the command path, likely cause, and the next recovery step. - If partial output is returned, label it clearly and identify which checks could not be completed. ## Quick Validation Run this minimal verification path before full execution when possible: ```bash python scripts/format_result.py --help ``` Expected output format: ```text Result file: meta_results_forest_plot_analyzer_result.md Validation summary: PASS/FAIL with brief notes Assumptions: explicit list if any ``` ## Deterministic Output Rules - Use the same section order for every supported request of this skill. - Keep output field names stable and do not rename documented keys across examples. - If a value is unavailable, emit an explicit placeholder instead of omitting the field. ## Completion Checklist - Confirm all required inputs were present and valid. - Confirm the supported execution path completed without unresolved errors. - Confirm the final deliverable matches the documented format exactly. - Confirm assumptions, limitations, and warnings are surfaced explicitly.